
Researchers at the Karolinska Institute have made a remarkable discovery about the versatility of a common dye called Thioflavin-T (THT). Beyond its well-known use in studying protein aggregation in neurodegenerative diseases, THT has now been shown to be an effective stain for neuronal cell bodies and nucleoli, offering a cost-effective alternative to existing fluorescent markers. This finding not only expands the applications of THT but also reveals some intriguing photochemical properties that could be harnessed for diverse purposes, from bio-cryptography to the study of UV radiation exposure. This comprehensive study delves into the fascinating world of THT, shedding light on its hidden potential and opening up new avenues for scientific exploration. Thioflavin, Amyloid, Neurodegenerative disease, Nucleolus, Fluorescence
Uncovering the Versatility of Thioflavin-T
Thioflavin-T (THT) is a well-known dye that has long been used in the study of protein aggregation, particularly in the context of neurodegenerative diseases. However, the researchers at the Karolinska Institute have now discovered that THT’s utility extends far beyond its canonical role. In this groundbreaking study, they have demonstrated that THT can be used as a highly effective stain for neuronal cell bodies and nucleoli, providing a cost-effective alternative to existing fluorescent markers.
Staining Neuronal Cells and Nucleoli with THT
The researchers found that when they applied THT to fixed brain tissue samples, it selectively stained the cell bodies and nucleoli of neurons, allowing for clear visualization of these structures. This staining pattern was remarkably similar to that of the widely used Nissl staining technique, which has been a staple in neuroscience research for over a century.

The researchers further confirmed the specificity of THT for neuronal cells by co-staining the samples with NeuroTrace® Deep Red (NTDR), a well-established fluorescent marker for neurons. The results showed a high degree of co-localization between THT and NTDR, indicating that THT can be used as an alternative to NTDR for the identification of neuronal cell bodies.
Interestingly, the researchers also discovered that THT can stain the nucleoli within these neuronal cells, a feature that could be useful in the study of nucleolar dynamics, which are closely linked to protein quality control and cellular stress response.
Expanding the Applications of THT
The versatility of THT does not stop there. The researchers found that THT staining is compatible with standard immunofluorescent techniques, allowing for the simultaneous visualization of neuronal cells, glial cells, and other cellular components. This means that THT can be easily integrated into existing experimental workflows, providing a cost-effective and accessible tool for neuroscience research.

Fig. 1
But the most intriguing discovery was the previously unreported photochemical properties of THT. The researchers found that exposure to blue light can significantly enhance the fluorescence of THT, an effect that appears to be related to the formation of THT excimers (excited-state dimers). This finding opens up the possibility of using THT for bio-cryptography or as a marker for UV or blue light exposure, as the photo-enhancement effect can be used to store and retrieve information in a reversible manner.
Implications and Future Directions
The versatility of THT demonstrated in this study has far-reaching implications for the field of neuroscience. The ability to stain neuronal cell bodies and nucleoli using a simple and cost-effective method can greatly facilitate the study of brain structure and function, as well as the investigation of neurodegenerative diseases.

Fig. 2
Moreover, the discovery of THT’s photochemical properties presents exciting opportunities for further exploration. The potential applications of the blue light-induced photo-enhancement effect range from bio-cryptography to the study of UV radiation exposure, highlighting the diverse potential of this remarkable dye.
Bridging the Gap between Amyloid Detection and Neuronal Staining
Interestingly, the researchers also found that by adjusting the staining protocol, THT can be used to selectively stain amyloid plaques, a hallmark of many neurodegenerative diseases. This versatility allows researchers to use THT for both amyloid detection and neuronal staining, bridging the gap between these two important aspects of neuroscience research.
As the scientific community continues to explore the full potential of THT, this study has undoubtedly opened up new avenues for research and discovery. From its applications in neuroscience to its intriguing photochemical properties, THT has proven to be a truly remarkable and versatile tool that is poised to make significant contributions to our understanding of the brain and beyond.
Author credit: This article is based on research by Jin-Hong Min, Heela Sarlus, Sho Oasa, Robert A. Harris.
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